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Structure paper

TitleOne enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase.
Journal, issue, pagesIucrj, Vol. 4, Page 648-656, Year 2017
Publish dateOct 12, 2012 (structure data deposition date)
AuthorsFerraro, D.J. / Okerlund, A. / Brown, E. / Ramaswamy, S.
External linksIucrj / PubMed:28989720
MethodsX-ray diffraction
Resolution1.3 - 1.8 Å
Structure data

PDB-4hjl:
Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4hkv:
Naphthalene 1,2-Dioxygenase bound to benzamide
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4hm0:
Naphthalene 1,2-Dioxygenase bound to indole-3-acetate
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4hm2:
Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4hm3:
Naphthalene 1,2-Dioxygenase bound to ethylbenzene
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4hm4:
Naphthalene 1,2-Dioxygenase bound to indan
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4hm5:
Naphthalene 1,2-Dioxygenase bound to indene
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4hm6:
Naphthalene 1,2-Dioxygenase bound to phenetole
Method: X-RAY DIFFRACTION / Resolution: 1.499 Å

PDB-4hm7:
Naphthalene 1,2-Dioxygenase bound to styrene
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4hm8:
Naphthalene 1,2-Dioxygenase bound to thioanisole
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

Chemicals

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER

ChemComp-FE:
Unknown entry

ChemComp-15O:
1-chloronaphthalene

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-UNU:
BENZAMIDE

ChemComp-IAC:
1H-INDOL-3-YLACETIC ACID / hormone*YM

ChemComp-16M:
(ethylsulfanyl)benzene

ChemComp-PYJ:
PHENYLETHANE

ChemComp-16N:
2,3-dihydro-1H-indene

ChemComp-16Q:
ethoxybenzene

ChemComp-SYN:
ethenylbenzene

ChemComp-16R:
(methylsulfanyl)benzene

Source
  • pseudomonas sp. (bacteria)
  • pseudomonas sp. c18 (bacteria)
KeywordsOxidoreductase/Oxidoreductase inhibitor / Oxidoreductase-Oxidoreductase inhibitor complex

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