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TitleAn enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.
Journal, issue, pagesNat. Chem. Biol., Vol. 8, Page 933-940, Year 2012
Publish dateJun 17, 2010 (structure data deposition date)
AuthorsDeery, E. / Schroeder, S. / Lawrence, A.D. / Taylor, S.L. / Seyedarabi, A. / Waterman, J. / Wilson, K.S. / Brown, D. / Geeves, M.A. / Howard, M.J. ...Deery, E. / Schroeder, S. / Lawrence, A.D. / Taylor, S.L. / Seyedarabi, A. / Waterman, J. / Wilson, K.S. / Brown, D. / Geeves, M.A. / Howard, M.J. / Pickersgill, R.W. / Warren, M.J.
External linksNat. Chem. Biol. / PubMed:23042036
MethodsX-ray diffraction
Resolution1.45 - 2.7 Å
Structure data

PDB-3njr:
Crystal structure of C-terminal domain of precorrin-6Y C5,15-methyltransferase from Rhodobacter capsulatus
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-4au1:
Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-4fdv:
CobH from Rhodobacter capsulatus (SB1003) in complex with HBA
Method: X-RAY DIFFRACTION / Resolution: 1.68 Å

Chemicals

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

ChemComp-GOL:
GLYCEROL

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-P8X:
DESMETHYL-HBA

ChemComp-SO4:
SULFATE ION

ChemComp-0UK:
3-[(1R,2R,3R,5R,6S,7R,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-hydroxy-2-oxoethyl)-3,12,17-tris(3-hydroxy-3-oxopropyl)-3,5,8,8,13,15,18,19-octamethyl-1,2,5,6,7,12,17,22-octahydrocorrin-7-yl]propanoic acid

Source
  • rhodobacter capsulatus (bacteria)
KeywordsTRANSFERASE / methyltransferase / decarboxylase / ISOMERASE / PRECORRIN / HBA / doubly wound sheet / sigmatrophic rearrangement / Hydrogenobyrinic acid

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