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TitleThe binding of C5-alkynyl and alkylfurano[2,3-d]pyrimidine glucopyranonucleosides to glycogen phosphorylase b: Synthesis, biochemical and biological assessment.
Journal, issue, pagesEur. J. Med. Chem., Vol. 54, Page 740-749, Year 2012
Publish dateApr 6, 2012 (structure data deposition date)
AuthorsKantsadi, A.L. / Manta, S. / Psarra, A.M. / Dimopoulou, A. / Kiritsis, C. / Parmenopoulou, V. / Skamnaki, V.T. / Zoumpoulakis, P. / Zographos, S.E. / Leonidas, D.D. / Komiotis, D.
External linksEur. J. Med. Chem. / PubMed:22770609
MethodsX-ray diffraction
Resolution2 - 2.65 Å
Structure data

PDB-4ej2:
Crystal structure of GPb in complex with DK10
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-4eke:
Crystal structure of GPb in complex with DK11
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4eky:
Crystal structure of GPb in complex with DK15
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-4el0:
Crystal structure of GPb in complex with DK16
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4el5:
Crystal structure of GPb in complex with DK12
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-D1F:
1-(beta-D-glucopyranosyl)-5-(hept-1-yn-1-yl)pyrimidine-2,4(1H,3H)-dione

ChemComp-HOH:
WATER

ChemComp-D1I:
3-(beta-D-glucopyranosyl)-6-pentylfuro[2,3-d]pyrimidin-2(3H)-one

ChemComp-D1J:
1-(beta-D-glucopyranosyl)-5-(pent-1-yn-1-yl)pyrimidine-2,4(1H,3H)-dione

ChemComp-D1K:
3-(beta-D-glucopyranosyl)-6-propylfuro[2,3-d]pyrimidin-2(3H)-one

ChemComp-D1M:
5-ethynyl-1-(beta-D-glucopyranosyl)pyrimidine-2,4(1H,3H)-dione

Source
  • oryctolagus cuniculus (rabbit)
KeywordsTRANSFERASE / ALPHA/BETA PROTEIN

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