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Structure paper

TitleIdentification of the HcgB enzyme in [Fe]-hydrogenase-cofactor biosynthesis.
Journal, issue, pagesAngew. Chem. Int. Ed. Engl., Vol. 52, Page 12555-12558, Year 2013
Publish dateMay 10, 2013 (structure data deposition date)
AuthorsFujishiro, T. / Tamura, H. / Schick, M. / Kahnt, J. / Xie, X. / Ermler, U. / Shima, S.
External linksAngew. Chem. Int. Ed. Engl. / PubMed:24249552
MethodsX-ray diffraction
Resolution1.91 - 2.44 Å
Structure data

PDB-3wb0:
HcgB from Methanocaldococcus jannaschii in complex with light-decomposed FeGP cofactor of [Fe]-hydrogenase
Method: X-RAY DIFFRACTION / Resolution: 1.91 Å

PDB-3wb1:
HcgB from Methanocaldococcus jannaschii
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3wb2:
HcgB from Methanocaldococcus jannaschii in complex with the guanylyl-pyridinol product in a model reaction of [Fe]-hydrogenase cofactor biosynthesis
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

Chemicals

ChemComp-FEG:
5'-O-[(S)-{[2-(carboxymethyl)-6-hydroxy-3,5-dimethylpyridin-4-yl]oxy}(hydroxy)phosphoryl]guanosine

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-YGP:
5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine

ChemComp-MG:
Unknown entry

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

Source
  • methanocaldococcus jannaschii (archaea)
KeywordsTRANSFERASE / GTP-binding domain / Guanylyltransferase

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