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Structure paper

TitleAn analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases.
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 68, Page 541-552, Year 2012
Publish dateNov 22, 2011 (structure data deposition date)
AuthorsBailey, D. / Carpenter, E.P. / Coker, A. / Coker, S. / Read, J. / Jones, A.T. / Erskine, P. / Aguilar, C.F. / Badasso, M. / Toldo, L. ...Bailey, D. / Carpenter, E.P. / Coker, A. / Coker, S. / Read, J. / Jones, A.T. / Erskine, P. / Aguilar, C.F. / Badasso, M. / Toldo, L. / Rippmann, F. / Sanz-Aparicio, J. / Albert, A. / Blundell, T.L. / Roberts, N.B. / Wood, S.P. / Cooper, J.B.
External linksActa Crystallogr. ,Sect. D / PubMed:22525752
MethodsX-ray diffraction
Resolution1.9 - 2.61 Å
Structure data

PDB-3uri:
Endothiapepsin-DB5 complex.
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3urj:
Type IV native endothiapepsin
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3url:
Endothiapepsin-DB6 complex.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3utl:
Human pepsin 3b
Method: X-RAY DIFFRACTION / Resolution: 2.61 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

Source
  • cryphonectria parasitica (chestnut blight fungus)
  • endothia parasitica (chestnut blight fungus)
  • homo sapiens (human)
KeywordsHYDROLASE/HYDROLASE INHIBITOR / hydrolase-hydrolase inhibitor complex / aspartic proteinase mechanism / transition state analogue. / HYDROLASE / ASPARTIC PROTEINASE / proteolysis / Secreted. / Stomach lumen

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