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Structure paper

TitleStructure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein.
Journal, issue, pagesPlos One, Vol. 7, Page e30929-e30929, Year 2012
Publish dateNov 10, 2011 (structure data deposition date)
AuthorsHan, J. / Kim, H.J. / Lee, S.C. / Hong, S. / Park, K. / Jeon, Y.H. / Kim, D. / Cheong, H.K. / Kim, H.S.
External linksPlos One / PubMed:22363519
MethodsX-ray diffraction
Resolution2.37 - 3.6 Å
Structure data

PDB-3ul7:
Crystal structure of the TV3 mutant F63W
Method: X-RAY DIFFRACTION / Resolution: 2.37 Å

PDB-3ul8:
Crystal structure of the TV3 mutant V134L
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3ul9:
structure of the TV3 mutant M41E
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3ula:
Crystal structure of the TV3 mutant F63W-MD-2-Eritoran complex
Method: X-RAY DIFFRACTION / Resolution: 3.6 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-FUL:
beta-L-fucopyranose

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-E55:
3-O-DECYL-2-DEOXY-6-O-{2-DEOXY-3-O-[(3R)-3-METHOXYDECYL]-6-O-METHYL-2-[(11Z)-OCTADEC-11-ENOYLAMINO]-4-O-PHOSPHONO-BETA-D-GLUCOPYRANOSYL}-2-[(3-OXOTETRADECANOYL)AMINO]-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE

Source
  • homo sapiens (human)
  • eptatretus burgeri (inshore hagfish)
KeywordsIMMUNE SYSTEM / LRR / protein binding / MD-2 / extracellular matrix / LPS binding

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