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Structure paper

TitleNovel structural insights into rotavirus recognition of ganglioside glycan receptors.
Journal, issue, pagesJ. Mol. Biol., Vol. 413, Page 929-939, Year 2011
Publish dateJun 20, 2011 (structure data deposition date)
AuthorsYu, X. / Coulson, B.S. / Fleming, F.E. / Dyason, J.C. / von Itzstein, M. / Blanchard, H.
External linksJ. Mol. Biol. / PubMed:21945555
MethodsX-ray diffraction
Resolution1.8 - 2.2 Å
Structure data

PDB-3sis:
Crystal structure of Porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3_Gc
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3sit:
Crystal structure of porcine CRW-8 Rotavirus VP8* in complex with aceramido-GM3
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-MN0:
methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid

ChemComp-NA:
Unknown entry

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-MRD:
(4R)-2-METHYLPENTANE-2,4-DIOL / precipitant*YM

Source
  • porcine rotavirus
KeywordsSUGAR BINDING PROTEIN / VIRAL PROTEIN / beta sandwich / lectin / GM3

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