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Structure paper

TitleA conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Journal, issue, pagesNature, Vol. 472, Page 238-242, Year 2011
Publish dateOct 27, 2010 (structure data deposition date)
AuthorsMontpetit, B. / Thomsen, N.D. / Helmke, K.J. / Seeliger, M.A. / Berger, J.M. / Weis, K.
External linksNature / PubMed:21441902
MethodsX-ray diffraction
Resolution1.401 - 4.001 Å
Structure data

PDB-3peu:
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 H337R and IP6
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-3pev:
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 and IP6
Method: X-RAY DIFFRACTION / Resolution: 2.499 Å

PDB-3pew:
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
Method: X-RAY DIFFRACTION / Resolution: 1.501 Å

PDB-3pey:
S. cerevisiae Dbp5 bound to RNA and ADP BeF3
Method: X-RAY DIFFRACTION / Resolution: 1.401 Å

PDB-3rrm:
S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-3rrn:
S. cerevisiae dbp5 l327v bound to gle1 h337r and ip6
Method: X-RAY DIFFRACTION / Resolution: 4.001 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-IHP:
INOSITOL HEXAKISPHOSPHATE

ChemComp-HOH:
WATER

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-BEF:
BERYLLIUM TRIFLUORIDE ION

ChemComp-NO3:
NITRATE ION

Source
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsHYDROLASE / RecA / HEAT / DEAD-box / ATPase / Helicase / mRNA export / Nuclear Pore / HYDROLASE/RNA / HYDROLASE-RNA complex / mRNA-export / HEAT-repeat / beta-propeller

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