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Structure paper

TitleBinding of nitrogen-containing bisphosphonates (N-BPs) to the Trypanosoma cruzi farnesyl diphosphate synthase homodimer.
Journal, issue, pagesProteins, Vol. 78, Page 888-899, Year 2010
Publish dateJul 15, 2009 (structure data deposition date)
AuthorsHuang, C.H. / Gabelli, S.B. / Oldfield, E. / Amzel, L.M.
External linksProteins / PubMed:19876942
MethodsX-ray diffraction
Resolution2.15 - 2.81 Å
Structure data

PDB-3iba:
Crystal structure of the complex of Trypanosoma cruzi farnesyl diphosphate synthase with zoledronate, IPP and Mg2+
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3ick:
Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with minodronate and isopentenyl disphosphate
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3icm:
Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with isopentenyl pyrophosphate, Mg2+ and 1-(2-Hydroxy-2,2-bis-phosphono-ethyl)-3-phenyl-pyridinium
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3icn:
Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with isopentenyl pyrophosphate and 3-Fluoro-1-(2-hydroxy-2,2-bis-phosphono-ethyl)-pyridinium
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3icz:
Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with 1-(2,2-Bis-phosphono-ethyl)-3-butyl-pyridinium and isopentenyl pyrophosphate
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-3id0:
Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with 3-Fluoro-1-(2-hydroxy-2,2-bisphosphono-ethyl)pyridinium
Method: X-RAY DIFFRACTION / Resolution: 2.81 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-ZOL:
ZOLEDRONIC ACID / medication*YM

ChemComp-SO4:
SULFATE ION

ChemComp-IPE:
3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE

ChemComp-HOH:
WATER

ChemComp-ACY:
ACETIC ACID

ChemComp-M0N:
(1-HYDROXY-2-IMIDAZO[1,2-A]PYRIDIN-3-YLETHANE-1,1-DIYL)BIS(PHOSPHONIC ACID)

ChemComp-P2H:
1-(2-hydroxy-2,2-diphosphonoethyl)-3-phenylpyridinium

ChemComp-NI9:
3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM

ChemComp-PB6:
3-[(1E)-but-1-en-1-yl]-1-(2,2-diphosphonoethyl)pyridinium

Source
  • trypanosoma cruzi (eukaryote)
KeywordsTRANSFERASE / FPPS / Trypanosoma cruzi / bisphosphonate / isopentenyl pyrophosphate / Chagas disease / Isoprene biosynthesis / farnesyl diphosphate synthase / zoledronate / risedronate / minodronate

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