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Structure paper

TitleRole of the sulfonium center in determining the ligand specificity of human s-adenosylmethionine decarboxylase.
Journal, issue, pagesBiochemistry, Vol. 48, Page 6423-6430, Year 2009
Publish dateApr 10, 2009 (structure data deposition date)
AuthorsBale, S. / Brooks, W. / Hanes, J.W. / Mahesan, A.M. / Guida, W.C. / Ealick, S.E.
External linksBiochemistry / PubMed:19527050
MethodsX-ray diffraction
Resolution1.81 - 2.24 Å
Structure data

PDB-3h0v:
Human AdoMetDC with 5'-Deoxy-5'-(dimethylsulfonio) adenosine
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-3h0w:
Human AdoMetDC with 5'-Deoxy-5'-[(N-dimethyl)amino]-8-methyl-adenosine
Method: X-RAY DIFFRACTION / Resolution: 1.81 Å

Chemicals

ChemComp-PUT:
1,4-DIAMINOBUTANE

ChemComp-M2T:
5'-deoxy-5'-(dimethyl-lambda~4~-sulfanyl)adenosine

ChemComp-PYR:
PYRUVIC ACID

ChemComp-HOH:
WATER

ChemComp-N8M:
5'-deoxy-5'-(dimethylamino)-8-methyladenosine

Source
  • homo sapiens (human)
KeywordsLYASE / AdoMetDC with competitive substrate analogs / Autocatalytic cleavage / Decarboxylase / Phosphoprotein / Polyamine biosynthesis / Pyruvate / S-adenosyl-L-methionine / Schiff base / Spermidine biosynthesis / Zymogen

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