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Structure paper

TitleU2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
Journal, issue, pagesJ. Mol. Biol., Vol. 389, Page 146-156, Year 2009
Publish dateFeb 4, 2009 (structure data deposition date)
AuthorsGurel, G. / Blaha, G. / Moore, P.B. / Steitz, T.A.
External linksJ. Mol. Biol. / PubMed:19362093
MethodsX-ray diffraction
Resolution2.7 - 3.2 Å
Structure data

PDB-3g4s:
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Method: X-RAY DIFFRACTION / Resolution: 3.2 Å

PDB-3g6e:
Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-3g71:
Co-crystal structure of Bruceantin bound to the large ribosomal subunit
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-K:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-SR:
STRONTIUM ION

ChemComp-MUL:
TIAMULIN / antibiotic, Antimicrobial*YM

ChemComp-CD:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-HMT:
(3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine / alkaloid*YM

ChemComp-WIN:
methyl (5beta,7alpha,9beta,10alpha,11alpha,12alpha,13beta,15alpha)-15-{[(2E)-3,4-dimethylpent-2-enoyl]oxy}-3,11,12-trihydroxy-2,16-dioxo-13,20-epoxypicras-3-en-21-oate / antitumor, antineoplastic*YM

Source
  • haloarcula marismortui (Halophile)
KeywordsRIBOSOME / large ribosomal subunit / tiamulin / Haloarcula marismortui / Ribonucleoprotein / Ribosomal protein / RNA-binding / rRNA-binding / tRNA-binding / Metal-binding / Zinc-finger / antibiotic specificity / homoharringtonine / bruceantin

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