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Structure paper

TitleMolecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase
Journal, issue, pagesNucleic Acids Res., Vol. 36, Page 3620-3629, Year 2008
Publish dateJan 26, 2008 (structure data deposition date)
AuthorsGondeau, C. / Chaloin, L. / Lallemand, P. / Roy, B. / Perigaud, C. / Barman, T. / Varga, A. / Vas, M. / Lionne, C. / Arold, S.T.
External linksNucleic Acids Res. / PubMed:18463139
MethodsX-ray diffraction
Resolution1.8 - 2.4 Å
Structure data

PDB-2zgv:
Crystal Structure of human phosphoglycerate kinase bound to D-ADP
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-3c39:
Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3c3a:
Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate and L-ADP
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3c3b:
Crystal Structure of human phosphoglycerate kinase bound to D-CDP
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3c3c:
Crystal Structure of human phosphoglycerate kinase bound to 3-phosphoglycerate and L-CDP
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM / Adenosine diphosphate

ChemComp-HOH:
WATER / Water

ChemComp-3PG:
3-PHOSPHOGLYCERIC ACID / 3-Phosphoglyceric acid

ChemComp-MG:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION / Phosphate

ChemComp-CDP:
CYTIDINE-5'-DIPHOSPHATE / Cytidine diphosphate

Source
  • homo sapiens (human)
KeywordsTRANSFERASE / PROTEIN-NUCLEOTIDE COMPLEX / Acetylation / ATP-binding / Cytoplasm / Disease mutation / Glycolysis / Hereditary hemolytic anemia / Kinase / Nucleotide-binding / Phosphoprotein / Polymorphism / Two domain / beta sandwich / L-enantiomer of ADP / D-enantiomer of CDP / L-enantiomer of CDP

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