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Structure paper

TitleGDP-4-Keto-6-deoxy-D-mannose 3-Dehydratase, Accommodating a Sugar Substrate in the Active Site.
Journal, issue, pagesJ. Biol. Chem., Vol. 283, Page 4295-4303, Year 2008
Publish dateNov 2, 2007 (structure data deposition date)
AuthorsCook, P.D. / Holden, H.M.
External linksJ. Biol. Chem. / PubMed:18045869
MethodsX-ray diffraction
Resolution1.7 Å
Structure data

PDB-3b8x:
Crystal structure of GDP-4-keto-6-deoxymannose-3-dehydratase (ColD) H188N mutant with bound GDP-perosamine
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-G4M:
[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S,5S,6R)-3,4-dihydroxy-5-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-6-methyltetrahydro-2H-pyran-2-yl dihydrogen diphosphate

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

Source
  • escherichia coli (E. coli)
KeywordsTRANSFERASE / aspartate aminotransferase / colitose / perosamine / o-antigen / PLP / pyridoxal phosphate

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