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Structure paper

TitleStructural and Mechanistic Insight Into the Basis of Mucopolysaccharidosis Iiib.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 105, Page 6560-, Year 2008
Publish dateSep 19, 2007 (structure data deposition date)
AuthorsFicko-Blean, E. / Stubbs, K.A. / Nemirovsky, O. / Vocadlo, D.J. / Boraston, A.B.
External linksProc. Natl. Acad. Sci. USA / PubMed:18443291
MethodsX-ray diffraction
Resolution2 - 2.36 Å
Structure data

PDB-2vc9:
Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin
Method: X-RAY DIFFRACTION / Resolution: 2.36 Å

PDB-2vca:
Family 89 glycoside hydrolase from Clostridium perfringens in complex with beta-N-acetyl-D-glucosamine
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-2vcb:
Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with PUGNAc
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2vcc:
Family 89 Glycoside Hydrolase from Clostridium perfringens
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-NOK:
2-ACETAMIDO-1,2-DIDEOXYNOJIRMYCIN

ChemComp-GOL:
GLYCEROL

ChemComp-CA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-SO4:
SULFATE ION

ChemComp-OAN:
O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE / inhibitor*YM

Source
  • clostridium perfringens (bacteria)
KeywordsHYDROLASE / MUCOPOLYSACCHARIDOSIS / 2-ACETAMIDO-1 / 2-DIDEOXYNOJIRMYCIN / GH89 / NAGLU / SANFILIPPO DISEASE / ALPHA-N-ACETYLGLUCOSAMINIDASE / FAMILY 89 GLYCOSIDE HYDROLASE / BETA-N-ACETYL-D-GLUCOSAMINE / PUGNAC

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