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Structure paper

TitleCrystal structure of Plasmodium falciparum spermidine synthase in complex with the substrate decarboxylated S-adenosylmethionine and the potent inhibitors 4MCHA and AdoDATO.
Journal, issue, pagesJ. Mol. Biol., Vol. 373, Page 167-177, Year 2007
Publish dateAug 30, 2006 (structure data deposition date)
AuthorsDufe, V.T. / Qiu, W. / Muller, I.B. / Hui, R. / Walter, R.D. / Al-Karadaghi, S.
External linksJ. Mol. Biol. / PubMed:17822713
MethodsX-ray diffraction
Resolution1.71 - 2.2 Å
Structure data

PDB-2i7c:
The crystal structure of spermidine synthase from p. falciparum in complex with AdoDATO
Method: X-RAY DIFFRACTION / Resolution: 1.71 Å

PDB-2pss:
The structure of Plasmodium falciparum spermidine synthase in its apo-form
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2pt6:
The structure of Plasmodium falciparum spermidine synthase in complex with decarboxylated S-adenosylmethionine
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2pt9:
The structure of Plasmodium falciparum spermidine synthase in complex with decarboxylated S-adenosylmethionine and the inhibitor cis-4-methylcyclohexylamine (4MCHA)
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

Chemicals

ChemComp-AAT:
S-ADENOSYL-1,8-DIAMINO-3-THIOOCTANE

ChemComp-1PG:
2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-S4M:
5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE

ChemComp-2MH:
cis-4-methylcyclohexanamine

Source
  • plasmodium falciparum (malaria parasite P. falciparum)
KeywordsTRANSFERASE / spermidine synthase / structural genomics consortium / SGC / Structural Biology of Malarial Parasites and Other Apicomplexans / dcAdoMet complex / INHIBITOR COMPLEX

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