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TitleStructural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Journal, issue, pagesBmc Struct. Biol., Vol. 7, Page 10-10, Year 2007
Publish dateMar 12, 2006 (structure data deposition date)
AuthorsFerraro, D.J. / Brown, E.N. / Yu, C.L. / Parales, R.E. / Gibson, D.T. / Ramaswamy, S.
External linksBmc Struct. Biol. / PubMed:17349044
MethodsX-ray diffraction
Resolution1.7 - 2.8 Å
Structure data

PDB-2gbw:
Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2gbx:
Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1 Bound to Biphenyl
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-2i7f:
Sphingomonas yanoikuyae B1 ferredoxin
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-FE:
Unknown entry

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER

ChemComp-OXY:
OXYGEN MOLECULE

ChemComp-HOH:
WATER

ChemComp-BNL:
BIPHENYL

ChemComp-ZN:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-CIT:
CITRIC ACID

Source
  • sphingobium yanoikuyae (bacteria)
KeywordsOXIDOREDUCTASE / RIESKE OXYGENASE / NON HEME IRON / DIOXYGENASE / RIESKE FERREDOXIN

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