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Structure paper

TitleRecognition of oxidatively modified bases within the biotin-binding site of avidin.
Journal, issue, pagesJ. Mol. Biol., Vol. 357, Page 263-274, Year 2006
Publish dateJun 30, 2005 (structure data deposition date)
AuthorsConners, R. / Hooley, E. / Clarke, A.R. / Thomas, S. / Brady, R.L.
External linksJ. Mol. Biol. / PubMed:16413579
MethodsX-ray diffraction
Resolution1.99 - 2.5 Å
Structure data

PDB-2a5b:
Avidin complexed with 8-oxodeoxyguanosine
Method: X-RAY DIFFRACTION / Resolution: 2.49 Å

PDB-2a5c:
Structure of Avidin in complex with the ligand 8-oxodeoxyadenosine
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-2a8g:
Structure of Avidin in complex with the ligand deoxyguanosine
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-8HG:
2'-DEOXY-8-OXOGUANOSINE

ChemComp-HOH:
WATER

ChemComp-8DA:
8-OXODEOXYADENOSINE

ChemComp-GNG:
2'-DEOXY-GUANOSINE

Source
  • gallus gallus (chicken)
KeywordsUNKNOWN FUNCTION / Avidin / Damaged DNA / 8-oxodeoxyguanosine / 8-oxodeoxyadenosine / Beta barrel

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