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TitleRational Design of Inhibitors of HIV-1 Tar RNA Through the Stabilisation of Electrostatic "Hot Spots"
Journal, issue, pagesJ. Mol. Biol., Vol. 336, Page 343-, Year 2004
Publish dateDec 18, 2003 (structure data deposition date)
AuthorsDavis, B. / Afshar, M. / Varani, G. / Murchie, A.I.H. / Karn, J. / Lentzen, G. / Drysdale, M.J. / Bower, J. / Potter, A.J. / Aboul-Ela, F.
External linksJ. Mol. Biol. / PubMed:14757049
MethodsNMR (solution)
Structure data

PDB-1uud:
NMR structure of a synthetic small molecule, rbt203, bound to HIV-1 TAR RNA
Method: SOLUTION NMR

PDB-1uui:
NMR structure of a synthetic small molecule, rbt158, bound to HIV-1 TAR RNA
Method: SOLUTION NMR

Chemicals

ChemComp-P14:
N-[2-(2-{[(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)AMINO]METHYL}-4-METHOXYPHENOXY)ETHYL]GUANIDINE

ChemComp-P12:
4-[AMINO(IMINO)METHYL]-1-[2-(3-AMMONIOPROPOXY)-5-METHOXYBENZYL]PIPERAZIN-1-IUM

Source
  • human immunodeficiency virus 1 (clone 12)
  • human immunodeficiency virus type 1 (clone 12)
KeywordsHIV-1 / TAR RNA / DRUG DESIGN / LIGAND-RNA INTERACTION / RNA BULGE / INHIBITOR

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