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TitleStructures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution.
Journal, issue, pagesBiochemistry, Vol. 43, Page 2384-2393, Year 2004
Publish dateJan 8, 2004 (structure data deposition date)
AuthorsAnand, R. / Kaminski, P.A. / Ealick, S.E.
External linksBiochemistry / PubMed:14992575
MethodsX-ray diffraction
Resolution2.1 - 2.24 Å
Structure data

PDB-1s2d:
Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA)
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-1s2g:
Purine 2'deoxyribosyltransferase + 2'-deoxyadenosine
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-1s2i:
Purine 2'deoxyribosyltransferase + bromopurine
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-1s2l:
Purine 2'deoxyribosyltransferase native structure
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-1s3f:
Purine 2'-deoxyribosyltransferase + selenoinosine
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

Chemicals

ChemComp-ADE:
ADENINE

ChemComp-V3M:
2-deoxy-2-fluoro-alpha-D-arabinofuranose

ChemComp-HOH:
WATER

ChemComp-3D1:
(2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol

ChemComp-BP1:
6-BROMO-7H-PURINE

ChemComp-SNI:
9-(3,4-DIHYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YL)-1,9-DIHYDRO-PURINE-6-THIONE

Source
  • lactobacillus helveticus (bacteria)
KeywordsTRANSFERASE / ribosylate intermediate / PTD / AraA / 2'-deoxyadenosine / 2'-purine deoxyribosyltansferase / bropmpurine / BrPur / native / selenoinosine complex

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