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Structure paper

Title5-Thio-d-glycopyranosylamines and their amidinium salts as potential transition-state mimics of glycosyl hydrolases: synthesis, enzyme inhibitory activities, X-ray crystallography, and molecular modeling
Journal, issue, pagesTETRAHEDRON ASYMMETRY, Vol. 16, Page 1035-1046, Year 2005
Publish dateSep 30, 2003 (structure data deposition date)
AuthorsKavelekar, L.M. / Kuntz, D.A. / Xin, W. / Johnston, B.D. / Svensson, B. / Rose, D.R. / Pinto, B.M.
External linksTETRAHEDRON ASYMMETRY / Search PubMed
MethodsX-ray diffraction
Resolution1.8 - 1.95 Å
Structure data

PDB-1r33:
Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamine
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-1r34:
Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamidinium salt
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-ZN:
Unknown entry

ChemComp-LKA:
5-thio-alpha-D-mannopyranosylamine

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-LKS:
N-[(1Z)-2-phenylethanimidoyl]-5-thio-alpha-D-mannopyranosylamine

Source
  • drosophila melanogaster (fruit fly)
KeywordsHYDROLASE / GLYCOSYL HYDROLASE FAMILY 38

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