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TitleStructural basis for substrate specificity of Escherichia coli purine nucleoside phosphorylase.
Journal, issue, pagesJ. Biol. Chem., Vol. 278, Page 47110-47118, Year 2003
Publish dateJun 5, 2003 (structure data deposition date)
AuthorsBennett, E.M. / Li, C. / Allan, P.W. / Parker, W.B. / Ealick, S.E.
External linksJ. Biol. Chem. / PubMed:12937174
MethodsX-ray diffraction
Resolution1.9 - 2.5 Å
Structure data

PDB-1pk7:
Crystal Structure of E. coli purine nucleoside phosphorylase complexed with adenosine and sulfate/phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-1pk9:
Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoroadenosine and sulfate/phosphate
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1pke:
Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine and sulfate/phosphate
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-1pr0:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with Inosine and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-1pr1:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with Formycin B and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-1pr2:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-[2-deoxyribofuranosyl]-6-methylpurine and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-1pr4:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-ribofuranosyl-6-methylthiopurine and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-1pr5:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with 7-deazaadenosine and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-1pr6:
Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-xylofuranosyladenine and Phosphate/Sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-1pw7:
Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 9-beta-D-arabinofuranosyladenine and sulfate/phosphate
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-ADN:
ADENOSINE

ChemComp-HOH:
WATER

ChemComp-2FA:
2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL

ChemComp-2FD:
5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL

ChemComp-NOS:
INOSINE

ChemComp-FMB:
FORMYCIN B

ChemComp-MDR:
9-(2-DEOXY-BETA-D-RIBOFURANOSYL)-6-METHYLPURINE

ChemComp-MTP:
2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL

ChemComp-TBN:
'2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL

ChemComp-XYA:
2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL

ChemComp-RAB:
2-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL / antivirus*YM

Source
  • escherichia coli o157:h7 (bacteria)
  • escherichia coli (E. coli)
KeywordsTRANSFERASE / hexamer / protein-nucleoside complex / trimer of dimers

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