Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Standalone anti-phage HEPN nuclease PD-T7-3 is activated by ssDNA for tRNA cleavage
Journal, issue, pages	To Be Published
Publish date	Dec 23, 2025 (structure data deposition date)
Authors	Puteikiene R / Vassallo CN / Silanskas A / Songailiene I / Juozapaitis J / Laub MT / Sasnauskas G
External links	Search PubMed
Methods	EM (single particle)
Resolution	2.89 - 3.63 Å
Structure data	EMDB-56161: Consensus map of the bacterial antiviral defense protein PD-T7-3 Method: EM (single particle) / Resolution: 3.26 Å EMDB-56162: Focus map of chains A and B of the bacterial antiviral defense protein PD-T7-3 Method: EM (single particle) / Resolution: 3.27 Å EMDB-56163: Focus map of chain C of the bacterial antiviral defense protein PD-T7-3 Method: EM (single particle) / Resolution: 3.43 Å 56164 9tra EMDB-56164, PDB-9tra: Bacterial antiviral defense protein PD-T7-3 Method: EM (single particle) / Resolution: 3.32 Å EMDB-56165: Consensus map of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA Method: EM (single particle) / Resolution: 2.95 Å EMDB-56166: Focus map of chains A and B of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA Method: EM (single particle) / Resolution: 2.89 Å EMDB-56167: Focus map of chain C of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA Method: EM (single particle) / Resolution: 2.93 Å 56168 9trc EMDB-56168, PDB-9trc: Bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA Method: EM (single particle) / Resolution: 2.92 Å EMDB-56169: Consensus map of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA and a fragment of RNA Method: EM (single particle) / Resolution: 3.24 Å EMDB-56170: Focus map of chains A and B of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA and a fragment of RNA Method: EM (single particle) / Resolution: 3.28 Å EMDB-56171: Focus map of chain C of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA and a fragment of RNA Method: EM (single particle) / Resolution: 3.63 Å 56172 9trd EMDB-56172, PDB-9trd: Bacterial antiviral defense protein PD-T7-3 (H122A) in complex with single-stranded DNA and a fragment of RNA Method: EM (single particle) / Resolution: 3.38 Å EMDB-56173: Consensus map of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with a fragment of RNA Method: EM (single particle) / Resolution: 2.97 Å EMDB-56174: Focus map of chains A and B of the bacterial antiviral defense protein PD-T7-3 (H122A) in a complex with a fragment of RNA Method: EM (single particle) / Resolution: 3.04 Å EMDB-56175: Focus map of chain C of the bacterial antiviral defense protein PD-T7-3 (H122A) in complex with a fragment of RNA Method: EM (single particle) / Resolution: 3.23 Å 56176 9tre EMDB-56176, PDB-9tre: Bacterial antiviral defense protein PD-T7-3 (H122A) in complex with a fragment of RNA Method: EM (single particle) / Resolution: 3.08 Å
Source	escherichia coli (E. coli) synthetic construct (others)
Keywords	ANTIVIRAL PROTEIN / HEPN domain / nuclease / bacterial antiviral protein / PD-T7-3