Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Interplay Between DNA Supercoiling and RNA Polymerase Localization at Plectoneme Apices Modulate Transcription Dynamics
Journal, issue, pages	To Be Published
Publish date	Nov 11, 2024 (structure data deposition date)
Authors	Zhang M / Bustamante C
External links	Search PubMed
Methods	EM (tomography)
Structure data	EMDB-47843: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under low salt conditions (5 mM K+) Method: EM (tomography) EMDB-47844: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) Method: EM (tomography) EMDB-47847: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) with stalled RNA polymerase bound Method: EM (tomography) EMDB-47849: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) with dCas9 bound Method: EM (tomography) EMDB-47850: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) with RNA polymerase bound during active transcription Method: EM (tomography) EMDB-47851: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) in the presence of stalled RNA polymerase and dCas9 Method: EM (tomography) EMDB-47853: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) in the presence of transcribed RNA polymerase and dCas9 Method: EM (tomography) EMDB-47855: Montaged cryo-ET map of individual particle 3D reconstructions of ~2 kb negatively supercoiled plasmids (delta Lk centered on -15) under near physiological salt condition (40 mM K+, 5 mM Mg2+) in the presence of transcribed RNA polymerase and Topoisomerase I Method: EM (tomography)
Source	Escherichia coli (E. coli)