タイトル | A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. |
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ジャーナル・号・ページ | Nat Commun, Vol. 7, Page 10900-10900, Year 2016 |
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掲載日 | 2015年7月31日 (構造データの登録日) |
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著者 | Huber, E.M. / Heinemeyer, W. / Li, X. / Arendt, C.S. / Hochstrasser, M. / Groll, M. |
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リンク | Nat Commun / PubMed:26964885 |
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手法 | X線回折 |
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解像度 | 2.3 - 2.9 Å |
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構造データ | PDB-5cz4: Yeast 20S proteasome at 2.3 A resolution 手法: X-RAY DIFFRACTION / 解像度: 2.3 Å PDB-5cz5: Yeast 20S proteasome beta1-T1A mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.8 Å PDB-5cz6: Yeast 20S proteasome beta5-T1A mutant in complex with Syringolin A, propeptide expressed in trans 手法: X-RAY DIFFRACTION / 解像度: 2.7 Å PDB-5cz7: Yeast 20S proteasome beta5-T1A beta5-K81R double mutant in complex with Bortezomib, propeptide expressed in cis 手法: X-RAY DIFFRACTION / 解像度: 2.5 Å PDB-5cz8: Yeast 20S proteasome beta5-L(-49)S-K33A mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.8 Å PDB-5cz9: Yeast 20S proteasome beta5-D17N mutant in complex with Carfilzomib; Propeptide expressed in trans 手法: X-RAY DIFFRACTION / 解像度: 2.9 Å PDB-5cza: Yeast 20S proteasome beta5-D166N mutant 手法: X-RAY DIFFRACTION / 解像度: 2.5 Å PDB-5d0s: Yeast 20S proteasome beta5-D166N mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.5 Å PDB-5d0t: Yeast 20S proteasome beta5-D166N mutant in complex with MG132 手法: X-RAY DIFFRACTION / 解像度: 2.6 Å PDB-5d0v: Yeast 20S proteasome beta5-T1C mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.9 Å PDB-5d0w: Yeast 20S proteasome beta5-T1S mutant 手法: X-RAY DIFFRACTION / 解像度: 2.8 Å PDB-5d0x: Yeast 20S proteasome beta5-T1S mutant in complex with Bortezomib 手法: X-RAY DIFFRACTION / 解像度: 2.6 Å PDB-5d0z: Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.9 Å PDB-5fg7: Yeast 20S proteasome beta2-T1A mutant 手法: X-RAY DIFFRACTION / 解像度: 2.7 Å PDB-5fg9: Yeast 20S proteasome beta2-T(-2)V mutant 手法: X-RAY DIFFRACTION / 解像度: 2.6 Å PDB-5fga: Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) 手法: X-RAY DIFFRACTION / 解像度: 2.7 Å PDB-5fgd: Yeast 20S proteasome beta5-H(-2)L-T1A double mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.8 Å PDB-5fge: Yeast 20S proteasome beta5-H(-2)T-T1A double mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.6 Å PDB-5fgf: Yeast 20S proteasome beta5-H(-2)A-T1A-K81R triple mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.6 Å PDB-5fgg: Yeast 20S proteasome beta5-L(-49S)_D17N double mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.7 Å PDB-5fgh: Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) in complex with MG132 手法: X-RAY DIFFRACTION / 解像度: 2.8 Å PDB-5fgi: Yeast 20S proteasome beta1-T1A beta2-T1A double mutant in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.9 Å PDB-5fhs: Yeast 20S proteasome beta5-K33A mutant (propeptide expressed in trans) in complex with Carfilzomib 手法: X-RAY DIFFRACTION / 解像度: 2.7 Å |
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化合物 | ChemComp-3BV: N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide / 薬剤, 抗がん剤, 阻害剤*YM
ChemComp-SRG: (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid
ChemComp-BO2: N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE / ボルテゾミブ / 薬剤, 抗がん剤*YM
ChemComp-ALD: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide
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由来 | - saccharomyces cerevisiae (strain atcc 204508 / s288c) (パン酵母)
- synthetic construct (人工物)
- saccharomyces cerevisiae s288c (パン酵母)
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キーワード | HYDROLASE/HYDROLASE INHIBITOR / HYDROLASE-HYDROLASE complex / Ubiquitin-Degradation System / Proteasome / NTN-Hydrolase / Thr-Protease / HYDROLASE-HYDROLASE INHIBITOR complex / Mutant / Inhibitor / Binding Analysis / HYDROLASE complex |
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