EMDB/PDB/SASBDBから引用されている文献のデータベース

キーワード
構造解析手法	All X線回折 NMR 電子顕微鏡小角散乱中性子線回折線維回折粉末回折赤外分光 EPR FRET 理論モデルハイブリッド
著者・登録者
ジャーナル
IF	>30 >20 >10 >5 all

タイトル	Symmetric scaffolds enable de novo modelling of RNA by cryoEM
ジャーナル・号・ページ	To Be Published
掲載日	2025年2月11日 (構造データの登録日)
著者	Jones CP / Ferre-D'Amare AR
リンク	PubMedで検索
手法	EM (単粒子)
解像度	2.52 - 3.92 Å
構造データ	49180 9na1 EMDB-49180, PDB-9na1: RNA scaffold 手法: EM (単粒子) / 解像度: 3.51 Å 49181 9na7 EMDB-49181, PDB-9na7: RNA scaffold 手法: EM (単粒子) / 解像度: 3.56 Å 49197 9nak EMDB-49197, PDB-9nak: RNA scaffold attached to tRNA 手法: EM (単粒子) / 解像度: 3.67 Å 49199 9nam EMDB-49199, PDB-9nam: RNA scaffold attached to Mango in the absence of ligand 手法: EM (単粒子) / 解像度: 2.87 Å 49200 9nap EMDB-49200, PDB-9nap: RNA scaffold attached to Mango in the presence of TO1-biotin 手法: EM (単粒子) / 解像度: 3.01 Å 49202 9nas EMDB-49202, PDB-9nas: RNA scaffold attached to disordered U1A stem loop 手法: EM (単粒子) / 解像度: 2.72 Å 49226 9nbc EMDB-49226, PDB-9nbc: RNA scaffold attached to 8-oxoguanine riboswitch aptamer 手法: EM (単粒子) / 解像度: 2.87 Å 49229 9nbh EMDB-49229, PDB-9nbh: RNA scaffold attached to 8-oxoguanine riboswitch aptamer core only 手法: EM (単粒子) / 解像度: 2.52 Å 49272 9ndd EMDB-49272, PDB-9ndd: RNA scaffold attached to 8-oxoguanine riboswitch aptamer, combined core plus aptamer 手法: EM (単粒子) / 解像度: 2.67 Å 49278 9ndv EMDB-49278, PDB-9ndv: Scaffold attached to quinine-I aptamer (Tonic) local refinement of aptamer 手法: EM (単粒子) / 解像度: 2.92 Å 49279 9ndw EMDB-49279, PDB-9ndw: Scaffold attached to quinine-I aptamer (Tonic) local refinement of core 手法: EM (単粒子) / 解像度: 2.71 Å 49280 9ndx EMDB-49280, PDB-9ndx: Scaffold attached to quinine-I aptamer (Tonic) refinement of aptamer and core 手法: EM (単粒子) / 解像度: 2.94 Å EMDB-49309: Scaffold attached to Mango without ligand, local refinement of core, tilted data collection of tetramer 手法: EM (単粒子) / 解像度: 3.41 Å EMDB-49310: Scaffold attached to Mango without ligand, local refinement of aptamer, tilted data collection of tetramer 手法: EM (単粒子) / 解像度: 3.49 Å EMDB-49332: RNA scaffold attached to 8-oxoguanine riboswitch aptamer Glacios data 手法: EM (単粒子) / 解像度: 3.92 Å EMDB-49334: RNA scaffold attached to 8-oxoguanine riboswitch core Glacios data 手法: EM (単粒子) / 解像度: 3.35 Å
化合物	ChemComp-MG: Unknown entry ChemComp-HOH: WATER ChemComp-K: Unknown entry ChemComp-EKJ: 4-[(3-{2-[(2-methoxyethyl)amino]-2-oxoethyl}-1,3-benzothiazol-3-ium-2-yl)methyl]-1-methylquinolin-1-ium ChemComp-OXG: 8-OXOGUANINE ChemComp-QI9: Quinine / 薬剤*YM
由来	unidentified (未定義) synthetic construct (人工物) other sequences (unknown)
キーワード	RNA / viral RNA / scaffold / engineering / Riboswitch / aptamer / Synthetic