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-Structure paper
タイトル | Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. |
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ジャーナル・号・ページ | Sci Rep, Vol. 10, Issue 1, Page 16301, Year 2020 |
掲載日 | 2020年10月1日 |
著者 | Eileen L Murphy / Kavindra V Singh / Bryant Avila / Torsten Kleffmann / Steven T Gregory / Barbara E Murray / Kurt L Krause / Reza Khayat / Gerwald Jogl / |
PubMed 要旨 | Enterococcus faecalis is a gram-positive organism responsible for serious infections in humans, but as with many bacterial pathogens, resistance has rendered a number of commonly used antibiotics ...Enterococcus faecalis is a gram-positive organism responsible for serious infections in humans, but as with many bacterial pathogens, resistance has rendered a number of commonly used antibiotics ineffective. Here, we report the cryo-EM structure of the E. faecalis 70S ribosome to a global resolution of 2.8 Å. Structural differences are clustered in peripheral and solvent exposed regions when compared with Escherichia coli, whereas functional centres, including antibiotic binding sites, are similar to other bacterial ribosomes. Comparison of intersubunit conformations among five classes obtained after three-dimensional classification identifies several rotated states. Large ribosomal subunit protein bL31, which forms intersubunit bridges to the small ribosomal subunit, assumes different conformations in the five classes, revealing how contacts to the small subunit are maintained throughout intersubunit rotation. A tRNA observed in one of the five classes is positioned in a chimeric pe/E position in a rotated ribosomal state. The 70S ribosome structure of E. faecalis now extends our knowledge of bacterial ribosome structures and may serve as a basis for the development of novel antibiotic compounds effective against this pathogen. |
リンク | Sci Rep / PubMed:33004869 / PubMed Central |
手法 | EM (単粒子) |
解像度 | 2.9 - 4.14 Å |
構造データ | EMDB-0656, PDB-6o8w: EMDB-0657, PDB-6o8x: EMDB-0658, PDB-6o8y: EMDB-0659, PDB-6o8z: EMDB-0660, PDB-6o90: EMDB-21562, PDB-6w6p: EMDB-21907, PDB-6wu9: EMDB-21908, PDB-6wua: EMDB-21909, PDB-6wub: |
化合物 | ChemComp-ZN: |
由来 |
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キーワード | RIBOSOME / 70S / pathogen / antibiotic development / antibiotic resistant |