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Structure paper

TitleThe molecular basis of the neutralization breadth of the RBD-specific antibody CoV11.
Journal, issue, pagesFront Immunol, Vol. 14, Page 1178355-1178355, Year 2023
Publish dateSep 9, 2021 (structure data deposition date)
AuthorsTolbert, W.D. / Chen, Y. / Sun, L. / Benlarbi, M. / Ding, S. / Manickam, R. / Pangaro, E. / Nguyen, D.N. / Gottumukkala, S. / Cote, M. ...Tolbert, W.D. / Chen, Y. / Sun, L. / Benlarbi, M. / Ding, S. / Manickam, R. / Pangaro, E. / Nguyen, D.N. / Gottumukkala, S. / Cote, M. / Gonzalez, F.J. / Finzi, A. / Tehrani, Z.R. / Sajadi, M.M. / Pazgier, M.
External linksFront Immunol / PubMed:37334379
MethodsX-ray diffraction
Resolution2.05 - 2.4 Å
Structure data

PDB-7s4s:
Crystal Structure of SARS-CoV-2 S receptor-binding domain (RBD) in complex CoV11 Fab
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-7urq:
Crystal Structure of SARS-CoV-2 S delta variant receptor-binding domain (RBD) in complex CoV11 Fab crystal form 1
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-7urs:
Crystal Structure of SARS-CoV-2 S delta variant receptor-binding domain (RBD) in complex CoV11 Fab crystal form 2
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-SO4:
SULFATE ION

ChemComp-ACT:
ACETATE ION

ChemComp-HOH:
WATER

ChemComp-CIT:
CITRIC ACID

ChemComp-PO4:
PHOSPHATE ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • severe acute respiratory syndrome coronavirus 2
  • homo sapiens (human)
KeywordsVIRAL PROTEIN/Immune System / SARS-CoV-2 S RBD Fab complex / SARS-CoV-2 S receptor-binding domain antibody Fab complex / COVID-19 spike protein antibody Fab complex / VIRAL PROTEIN / VIRAL PROTEIN-Immune System complex / delta variant

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