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TitleDiscovery of Quinoxaline-Based P1-P3 Macrocyclic NS3/4A Protease Inhibitors with Potent Activity against Drug-Resistant Hepatitis C Virus Variants.
Journal, issue, pagesJ. Med. Chem., Vol. 64, Page 11972-11989, Year 2021
Publish dateDec 29, 2020 (structure data deposition date)
AuthorsNageswara Rao, D. / Zephyr, J. / Henes, M. / Chan, E.T. / Matthew, A.N. / Hedger, A.K. / Conway, H.L. / Saeed, M. / Newton, A. / Petropoulos, C.J. ...Nageswara Rao, D. / Zephyr, J. / Henes, M. / Chan, E.T. / Matthew, A.N. / Hedger, A.K. / Conway, H.L. / Saeed, M. / Newton, A. / Petropoulos, C.J. / Huang, W. / Kurt Yilmaz, N. / Schiffer, C.A. / Ali, A.
External linksJ. Med. Chem. / PubMed:34405680
MethodsX-ray diffraction
Resolution1.58 - 1.88 Å
Structure data

PDB-7l7l:
Crystal structure of HCV NS3/4A D168A protease in complex with NR01-129
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-7l7n:
Crystal structure of HCV NS3/4A D168A protease in complex with NR02-59
Method: X-RAY DIFFRACTION / Resolution: 1.59 Å

PDB-7l7o:
Crystal structure of HCV NS3/4A D168A protease in complex with NR04-49
Method: X-RAY DIFFRACTION / Resolution: 1.72 Å

PDB-7l7p:
Crystal structure of HCV NS3/4A D168A protease in complex with CH-24
Method: X-RAY DIFFRACTION / Resolution: 1.58 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-XSS:
1,1,1-trifluoro-2-methylpropan-2-yl [(2R,6S,12Z,13aS,14aR,16aS)-2-{[6-methoxy-3-(trifluoromethyl)quinoxalin-2-yl]oxy}-14a-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl]carbamate

ChemComp-HOH:
WATER

ChemComp-XSV:
1-(trifluoromethyl)cyclobutyl [(2R,6S,12Z,13aS,14aR,16aS)-2-{[6-methoxy-3-(trifluoromethyl)quinoxalin-2-yl]oxy}-14a-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl]carbamate

ChemComp-SO4:
SULFATE ION

ChemComp-XSY:
(1R,3r,5S)-bicyclo[3.1.0]hexan-3-yl [(2R,6S,12Z,13aS,14aR,16aS)-2-{[6-methoxy-3-(trifluoromethyl)quinoxalin-2-yl]oxy}-14a-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl]carbamate

ChemComp-XT4:
tert-butyl [(2R,6S,12Z,13aS,14aR,16aS)-2-{[6-methoxy-3-(trifluoromethyl)quinoxalin-2-yl]oxy}-14a-{[(1-methylcyclopropyl)sulfonyl]carbamoyl}-5,16-dioxo-1,2,3,5,6,7,8,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-6-yl]carbamate

Source
  • hepacivirus c
KeywordsHYDROLASE/INHIBITOR / NS3/4a Protease / Hepatitis C virus / Drug Resistance / Protease inhibitor / HYDROLASE-HYDROLASE Inhibitor complex / HYDROLASE / HYDROLASE-INHIBITOR complex

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