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Structure paper

TitleStructural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Journal, issue, pagesCell Chem Biol, Vol. 25, Page 1128-1139.e3, Year 2018
Publish dateApr 20, 2018 (structure data deposition date)
AuthorsO'Reilly, M.C. / Dong, S.H. / Rossi, F.M. / Karlen, K.M. / Kumar, R.S. / Nair, S.K. / Blackwell, H.E.
External linksCell Chem Biol / PubMed:30033130
MethodsX-ray diffraction
Resolution1.63 - 1.9 Å
Structure data

PDB-6d6a:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 10
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-6d6b:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 11
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-6d6c:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 12
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-6d6d:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 13
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-6d6l:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-6d6m:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-6d6n:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 16
Method: X-RAY DIFFRACTION / Resolution: 1.81 Å

PDB-6d6o:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 17
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-6d6p:
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 19
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-FXD:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl benzoate

ChemComp-HOH:
WATER

ChemComp-FXS:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-nitrobenzoate

ChemComp-FYD:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-methoxybenzoate

ChemComp-HIS:
HISTIDINE

ChemComp-FY7:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-cyanobenzoate

ChemComp-FY4:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-chlorobenzoate

ChemComp-TX7:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-bromobenzoate

ChemComp-FXJ:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-methoxybenzoate

ChemComp-PHE:
PHENYLALANINE

ChemComp-FX7:
2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl octanoate

ChemComp-FY1:
N-{[3,5-dibromo-2-(methoxymethoxy)phenyl]methyl}-2-nitrobenzamide

Source
  • pseudomonas aeruginosa (strain atcc 15692 / dsm 22644 / cip 104116 / jcm 14847 / lmg 12228 / 1c / prs 101 / pao1) (bacteria)
  • pseudomonas aeruginosa pao1 (bacteria)
Keywordssignaling protein/agonist / LuxR receptor / signaling protein-agonist complex / SIGNALING PROTEIN

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