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Structure paper

TitleCrystal structures of the mitochondrial deacylase Sirtuin 4 reveal isoform-specific acyl recognition and regulation features.
Journal, issue, pagesNat Commun, Vol. 8, Page 1513-1513, Year 2017
Publish dateJul 20, 2017 (structure data deposition date)
AuthorsPannek, M. / Simic, Z. / Fuszard, M. / Meleshin, M. / Rotili, D. / Mai, A. / Schutkowski, M. / Steegborn, C.
External linksNat Commun / PubMed:29138502
MethodsX-ray diffraction
Resolution1.58 - 3.1 Å
Structure data

PDB-5oj7:
Sirtuin 4 orthologue from Xenopus Tropicalis in complex with ADP-ribose
Method: X-RAY DIFFRACTION / Resolution: 1.58 Å

PDB-5ojn:
Sirtuin 4 from Xenopus tropicalis in complex with thioacetyl-ADP-ribose
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-5ojo:
Sirtuin 5 from Danio rerio in complex with 3-hydroxy-3-methylglutaryl-CPS1 peptide
Method: X-RAY DIFFRACTION / Resolution: 3.1 Å

Chemicals

ChemComp-AR6:
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL

ChemComp-ZN:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-9X8:
thioacetyl-ADP-ribose

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-NA:
Unknown entry

Source
  • xenopus tropicalis (tropical clawed frog)
  • danio rerio (zebrafish)
  • homo sapiens (human)
KeywordsHYDROLASE / Sirt4 Deacylase Posttranslational modification / SIGNALING PROTEIN / Sirtuin / Sirt4 / Deacylase / Mitochondria / Sirt5

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