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Structure paper

TitleCryptosporidium and Toxoplasma Parasites are Inhibited by a Benzoxaborole Targeting Leucyl-tRNA Synthetase.
Journal, issue, pagesAntimicrob. Agents Chemother., Vol. 60, Page 5817-, Year 2016
Publish dateNov 20, 2015 (structure data deposition date)
AuthorsPalencia, A. / Liu, R. / Lukarska, M. / Gut, J. / Bougdour, A. / Touquet, B. / Wang, E. / Li, X. / Alley, M.R.K. / Freund, Y.R. ...Palencia, A. / Liu, R. / Lukarska, M. / Gut, J. / Bougdour, A. / Touquet, B. / Wang, E. / Li, X. / Alley, M.R.K. / Freund, Y.R. / Rosenthal, P.J. / Hakimi, M. / Cusack, S.
External linksAntimicrob. Agents Chemother. / PubMed:27431220
MethodsX-ray diffraction
Resolution1.77 - 2.7 Å
Structure data

PDB-5fog:
Crystal structure of hte Cryptosporidium muris cytosolic leucyl-tRNA synthetase editing domain complex with a post-transfer editing analogue of norvaline (Nv2AA)
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5fol:
Crystal structure of the Cryptosporidium muris cytosolic leucyl-tRNA synthetase editing domain complex with a post-transfer editing analogue of isoeucine (Ile2AA)
Method: X-RAY DIFFRACTION / Resolution: 1.77 Å

PDB-5fom:
Crystal structure of the Cryptosporidium muris cytosolic leucyl-tRNA synthetase editing domain complex with the adduct AMP-AN6426
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5fon:
Crystal structure of the Cryptosporidium muris cytosolic leucyl-tRNA synthetase editing domain (apo structure)
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

Chemicals

ChemComp-VRT:
2'-(L-NORVALYL)AMINO-2'-DEOXYADENOSINE

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-K:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-SO8:
2'-(L-ISOLEUCYL)AMINO-2'-DEOXYADENOSINE

ChemComp-A2H:
4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine

Source
  • cryptosporidium muris (eukaryote)
KeywordsLYASE / CRYPTOSPORIDIUM / LEUCINE-TRNA LIGASE (LEURS) ACTIVITY / ATP + L-LEUCINE + TRNA(LEUCINE) GIVE AMP + DIPHOSPHATE + L-LEUCYL-TRNA(LEUCINE) / POST-TRANSFER EDITING ACTIVITY OF LEURS / AMINOACYL-TRNA SYNTHETASE / PROTEIN BIOSYNTHESIS / NOVEL BORON INHIBITORS OF THE EDITING SITE OF LEURS / LIGASE

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