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TitleElucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation
Journal, issue, pagesCrystals, Vol. 12, Year 2022
Publish dateFeb 14, 2022 (structure data deposition date)
AuthorsBritikov, V.V. / Timofeev, V.I. / Petrenko, D.E. / Britikova, E.V. / Nikolaeva, A.Y. / Vlaskina, A.V. / Boyko, K.M. / Mikhailova, A.G. / Rakitina, T.V.
External linksCrystals / Search PubMed
MethodsX-ray diffraction
Resolution1.7 - 1.9 Å
Structure data

PDB-7yws:
Modified oligopeptidase B from S. proteomaculans in intermediate conformation with 3 spermine molecules at 1.7 A resolution
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-7yx7:
Modified oligopeptidase B from S. proteomaculans in intermediate conformation with 1 spermine molecule at 1.72 A resolution
Method: X-RAY DIFFRACTION / Resolution: 1.72 Å

PDB-7zjz:
catalytically non active S532A mutant of oligopeptidase B from S. proteomaculans
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-SPM:
SPERMINE

ChemComp-HOH:
WATER

Source
  • serratia proteamaculans (bacteria)
KeywordsHYDROLASE

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