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Structure paper

TitlePeptide Mimetic Factor VIIa Inhibitor: Importance of Hydrophilic Pocket in S2 Site to Improve Selectivity aganist Thrombin
Journal, issue, pagesLETT. DRUG DES. DISCOVERY, Vol. 2, Page 177-181, Year 2005
Publish dateJun 20, 2008 (structure data deposition date)
AuthorsKadono, S. / Sakamoto, A. / Kikuchi, Y. / Oh-eda, M. / Yabuta, N. / Koga, T. / Hattori, K. / Shiraishi, T. / Haramura, M. / Kodama, H. ...Kadono, S. / Sakamoto, A. / Kikuchi, Y. / Oh-eda, M. / Yabuta, N. / Koga, T. / Hattori, K. / Shiraishi, T. / Haramura, M. / Kodama, H. / Esaki, T. / Sato, H. / Watanabe, S. / Itoh, S. / Ohta, M. / Kozono, T.
External linksSearch PubMed
MethodsX-ray diffraction
Resolution2.7 Å
Structure data

PDB-2zp0:
Human factor viia-tissue factor complexed with benzylsulfonamide-D-ile-gln-P-aminobenzamidine
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

Chemicals

ChemComp-BGC:
beta-D-glucopyranose

ChemComp-FUC:
alpha-L-fucopyranose

ChemComp-CA:
Unknown entry

ChemComp-PI0:
(2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[[(2R,3R)-3-methyl-2-(phenylmethylsulfonylamino)pentanoyl]amino]pentanediamide

ChemComp-HOH:
WATER

Source
  • homo sapiens (human)
KeywordsHYDROLASE/BLOOD CLOTTING / SERINE PROTEASE / Blood coagulation / Cleavage on pair of basic residues / Disease mutation / EGF-like domain / Gamma-carboxyglutamic acid / Glycoprotein / Hydrolase / Hydroxylation / Protease / Zymogen / Lipoprotein / Membrane / Palmitate / Transmembrane / HYDROLASE-BLOOD CLOTTING COMPLEX

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