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Structure paper

TitleKrypton Derivatization of [FeFe] Hydrogenase from Desulfovibrio desulfuricans Reveals its Gas Channel
Journal, issue, pagesTo Be Published
Publish dateJan 26, 2024 (structure data deposition date)
AuthorsBikbaev, K. / Harand, T. / Scheuenstuhl, L. / Carpentier, P. / Martini, M.A. / Birrell, J.A. / Span, I.
External linksSearch PubMed
MethodsX-ray diffraction
Resolution1.477 - 1.507 Å
Structure data

PDB-8rti:
Desulfovibrio desulfuricans [FeFe] hydrogenase in the apo form derivatized with krypton
Method: X-RAY DIFFRACTION / Resolution: 1.502 Å

PDB-8rxi:
Desulfovibrio desulfuricans [FeFe] hydrogenase in Hinact state derivatized with krypton
Method: X-RAY DIFFRACTION / Resolution: 1.477 Å

PDB-8rxj:
Desulfovibrio desulfuricans [FeFe] hydrogenase C178A mutant in Hinact-like state derivatized with krypton
Method: X-RAY DIFFRACTION / Resolution: 1.507 Å

Chemicals

ChemComp-KR:
KRYPTON

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-HOH:
WATER

ChemComp-TOE:
2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL

ChemComp-LFH:
dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+) sulphide

ChemComp-402:
dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+)

ChemComp-CYN:
CYANIDE ION

Source
  • desulfovibrio desulfuricans (bacteria)
KeywordsOXIDOREDUCTASE / [FeFe] hydrogenase / apo hydrogenase / iron-sulfur cluster / gas channel / krypton / inhibitor

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