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Structure paper

TitleSequential Conformational Activation of a CARF-Fused Adenosine Deaminase by Cyclic Oligoadenylates
Journal, issue, pagesTo Be Published
Publish dateApr 29, 2025 (structure data deposition date)
AuthorsRoth M / Shu Y / Trasandidou D / Zhao Y / van der Oost J / Li H
External linksSearch PubMed
MethodsEM (single particle)
Resolution2.45 - 3.17 Å
Structure data

70417

9of1

EMDB-70417: CryoEM structure of Cad1 in App form, symmetry expanded dimer, refined against a composite map
PDB-9of1: CryoEM structure of Cad1 in Apo form, symmetry expanded dimer, refined against a composite map
Method: EM (single particle) / Resolution: 2.7 Å

EMDB-70419: Consensus map of Cad1 in App form
Method: EM (single particle) / Resolution: 2.7 Å

70422

9ofb

EMDB-70422, PDB-9ofb:
CryoEM structure of Cad1 bound with cA4 and ATP, symmetry expanded dimer refined against a composite map
Method: EM (single particle) / Resolution: 2.68 Å

EMDB-70423: Focused map on CARF domain of Cad1 in Apo form
Method: EM (single particle) / Resolution: 2.87 Å

EMDB-70424: Focused map for the ADA domain of Cad1 in Apo form
Method: EM (single particle) / Resolution: 2.55 Å

EMDB-70425: Consensus map of Cad1 bound with cA4 and ATP
Method: EM (single particle) / Resolution: 2.68 Å

EMDB-70427: Focused map of the ADA domain of Cad1 bound with cA4 and ATP
Method: EM (single particle) / Resolution: 2.45 Å

70428

9ofc

EMDB-70428, PDB-9ofc:
CryoEM structure of Cad1 bound with cA4 and ATP, hexamer with three intact dimers
Method: EM (single particle) / Resolution: 3.17 Å

70429

9ofd

EMDB-70429, PDB-9ofd:
CryoEM structure of Cad1 bound with cA4 and ATP, hexamer with one intact dimer
Method: EM (single particle) / Resolution: 2.86 Å

70430

9ofe

EMDB-70430, PDB-9ofe:
CryoEM structure of Cad1 bound with cA4 and ATP, hexamer with two intact dimers
Method: EM (single particle) / Resolution: 2.68 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

Source
  • thermoanaerobaculum aquaticum (bacteria)
KeywordsIMMUNE SYSTEM / HYDROLASE / CRISPR-associated Rossman-fold (CARF) / ATP deaminase / CRISPR immunity / cooperative activation

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