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Structure paper

TitleKinetic and crystallographic studies of thrombin with Ac-(D)Phe-Pro-boroArg-OH and its lysine, amidine, homolysine, and ornithine analogs.
Journal, issue, pagesBiochemistry, Vol. 34, Page 3750-3757, Year 1995
Publish dateDec 27, 1994 (structure data deposition date)
AuthorsWeber, P.C. / Lee, S.L. / Lewandowski, F.A. / Schadt, M.C. / Chang, C.W. / Kettner, C.A.
External linksBiochemistry / PubMed:7893672
MethodsX-ray diffraction
Resolution1.95 - 2.4 Å
Structure data

PDB-1lhc:
HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BOROARG-OH
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-1lhd:
HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BOROLYS-OH
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-1lhe:
HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BORO-N-BUTYL-AMIDINO-GLYCINE-OH
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-1lhf:
HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BORO-HOMOLYS-OH
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-1lhg:
HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BOROORNITHINE-OH
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-DP7:
AC-(D)PHE-PRO-BOROARG-OH

ChemComp-HOH:
WATER

ChemComp-DI2:
AC-(D)PHE-PRO-BOROLYS-OH

ChemComp-DI3:
AC-(D)PHE-PRO-BORO-N-BUTYL-AMIDINO-GLYCINE-OH

ChemComp-DI4:
AC-(D)PHE-PRO-BOROHOMOLYS-OH

ChemComp-DI5:
AC-(D)PHE-PRO-BOROHOMOORNITHINE-OH

Source
  • hirudo medicinalis (medicinal leech)
  • homo sapiens (human)
KeywordsCOMPLEX (SERINE PROTEASE/INHIBITOR) / BLOOD COAGULATION / PLASMA / CALCIUM-BINDING / GLYCOPROTEIN / DUPLICATION / VITAMIN K / ZYMOGEN / GAMMA-CARBOXYGLUTAMIC ACID / ACUTE PHASE / LIVER / HYDROLASE / SERINE PROTEASE / KRINGLE / DISEASE MUTATION / COMPLEX (SERINE PROTEASE-INHIBITOR) / COMPLEX (SERINE PROTEASE-INHIBITOR) complex

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