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TitleMolecular determinants of selective and high-affinity binding of the scaffold protein PDZK1 to the urate transporter URAT1.
Journal, issue, pagesJ. Mol. Biol., Page 169615-169615, Year 2025
Publish dateJul 11, 2025 (structure data deposition date)
AuthorsMymrikov, E.V. / Wirth, C. / Heinicke, J.I. / Goll, J. / Kern, B.A. / Steck, C. / Iaroslavtceva, A.K. / Muhlethaler, T. / Kottgen, A. / Hunte, C.
External linksJ. Mol. Biol. / PubMed:41453723
MethodsX-ray diffraction
Resolution1.2 - 2 Å
Structure data

PDB-9rxn:
Structure of the PDZ1 domain from human PDZK1 (NHERF3) with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 1.36 Å

PDB-9rxo:
Structure of the PDZ2 domain from human PDZK1 (NHERF3) with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-9rxp:
Structure of the PDZ4 domain from human PDZK1 (NHERF3) with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 1.43 Å

PDB-9rxq:
Structure of the PDZ1 domain from human NHERF1 with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 1.38 Å

PDB-9rxr:
Structure of the PDZ1 domain from human PDZK1 (NHERF3) with the C-terminal residues (VLKSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 1.69 Å

PDB-9rxs:
Structure of the PDZ4 domain from human PDZK1 (NHERF3) with the C-terminal residues (VLKSTQF) of human URAT1 transporter (SLC22A12)
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-9rxt:
Structure of the PDZ1 domain from human NHERF1 with the C-terminal residues (NATRL) of the human sodium-dependent phosphate transporter 2A (NaPi-IIa, SLC34A1)
Method: X-RAY DIFFRACTION / Resolution: 1.36 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-TOE:
2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL

Source
  • homo sapiens (human)
KeywordsPROTEIN BINDING / Scaffold protein / PDZ domain / urate transporter / solute carrier / protein-protein interaction / NHERFs / phosphate transport

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