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TitleStructural characterisation of nucleotide sugar short-chain dehydrogenases/reductases from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus Delta H.
Journal, issue, pagesFebs J., Year 2025
Publish dateJul 1, 2019 (structure data deposition date)
AuthorsCarbone, V. / Schofield, L.R. / Edwards, P.J.B. / Sutherland-Smith, A.J. / Ronimus, R.S.
External linksFebs J. / PubMed:40903920
MethodsX-ray diffraction
Resolution1.97 - 2.3 Å
Structure data

PDB-6pmh:
Structure of Epimerase Mth375 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-6pnl:
Structure of Epimerase Mth375 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Method: X-RAY DIFFRACTION / Resolution: 2.01 Å

PDB-8w3u:
Structure of Epimerase Mth373 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-9ar1:
Structure of Epimerase Mth373 bound to uridine-5'-diphosphate-xylopyranose
Method: X-RAY DIFFRACTION / Resolution: 1.97 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

ChemComp-UDP:
URIDINE-5'-DIPHOSPHATE / UDP*YM

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-HOH:
WATER

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-MG:
Unknown entry

ChemComp-UDX:
URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE

Source
  • methanothermobacter thermautotrophicus (strain atcc 29096 / dsm 1053 / jcm 10044 / nbrc 100330 / delta h) (archaea)
  • methanothermobacter thermautotrophicus (archaea)
  • methanothermobacter thermautotrophicus str. delta h (archaea)
KeywordsISOMERASE / Pseudomurein / UDP-N-acetylglucosamine / epimerase / cell wall / Methanothermobacter / SUGAR BINDING PROTEIN / peptidoglycan / murein / GalE / WcaG / WbpP / WbmF

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