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Structure paper

TitleDiffusing protein binders to intrinsically disordered proteins.
Journal, issue, pagesNature, Vol. 644, Page 809-817, Year 2025
Publish dateJun 20, 2024 (structure data deposition date)
AuthorsLiu, C. / Wu, K. / Choi, H. / Han, H.L. / Zhang, X. / Watson, J.L. / Ahn, G. / Zhang, J.Z. / Shijo, S. / Good, L.L. ...Liu, C. / Wu, K. / Choi, H. / Han, H.L. / Zhang, X. / Watson, J.L. / Ahn, G. / Zhang, J.Z. / Shijo, S. / Good, L.L. / Fischer, C.M. / Bera, A.K. / Kang, A. / Brackenbrough, E. / Coventry, B. / Hick, D.R. / Qamar, S. / Li, X. / Decarreau, J. / Gerben, S.R. / Yang, W. / Goreshnik, I. / Vafeados, D. / Wang, X. / Lamb, M. / Murray, A. / Kenny, S. / Bauer, M.S. / Hoofnagle, A.N. / Zhu, P. / Knowles, T.P.J. / Baker, D.
External linksNature / PubMed:40739343
MethodsX-ray diffraction
Resolution1.87 - 2.4 Å
Structure data

PDB-9cc5:
De novo design of high-affinity protein binders to bio active peptide Amylin
Method: X-RAY DIFFRACTION / Resolution: 1.87 Å

PDB-9cc6:
De novo design of high-affinity protein binders to RNA binding domain of G3bp1
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-9nzh:
Crystal Structure of Amylin-NHO-18 binder complex
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

Source
  • synthetic construct (others)
  • homo sapiens (human)
KeywordsDE NOVO PROTEIN / protein design / diffusion / deep learning / binders / IDP / IDR / Amyloid / phase separation

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