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Structure paper

TitleStructures of Listeria monocytogenes MenD in ThDP-bound and in-crystallo captured intermediate I-bound forms.
Journal, issue, pagesActa Crystallogr. ,Sect. F, Vol. 81, Page 348-357, Year 2025
Publish dateNov 8, 2024 (structure data deposition date)
AuthorsBailey, M. / Given, F.M. / Ho, N.A.T. / Pearce, F.G. / Allison, T.M. / Johnston, J.M.
External linksActa Crystallogr. ,Sect. F / PubMed:40673487
MethodsX-ray diffraction
Resolution2.61 - 2.79 Å
Structure data

PDB-9e9b:
Crystal structure of L. monocytogenes MenD with Mg2+ and ThDP bound
Method: X-RAY DIFFRACTION / Resolution: 2.61 Å

PDB-9mnn:
Crystal structure of L. monocytogenes MenD with Mg2+ and intermediate I bound
Method: X-RAY DIFFRACTION / Resolution: 2.79 Å

Chemicals

ChemComp-TPP:
THIAMINE DIPHOSPHATE

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-TD6:
(4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid

Source
  • listeria monocytogenes 10403s (bacteria)
KeywordsTRANSFERASE / SEPHCHC synthase Decarboxylase ThDP-dependent enzyme

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