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TitleStructure and mechanism of an actin-dependent bacterial phosphoryl AMPylase.
Journal, issue, pagesNat. Chem. Biol., Year 2025
Publish dateJul 25, 2023 (structure data deposition date)
AuthorsChen, T.T. / Lu, Q. / Zheng, S.R. / Fu, J. / Chen, J. / Kang, L. / Wu, J. / Luo, J. / Tong, J. / Li, S. ...Chen, T.T. / Lu, Q. / Zheng, S.R. / Fu, J. / Chen, J. / Kang, L. / Wu, J. / Luo, J. / Tong, J. / Li, S. / Li, X. / Li, J. / Wang, S. / Feng, Y. / Luo, Z.Q. / Ouyang, S.
External linksNat. Chem. Biol. / PubMed:40588486
MethodsX-ray diffraction
Resolution2.6 - 3.41 Å
Structure data

PDB-8k6f:
LnaB-Actin-PRUb ternary complex
Method: X-RAY DIFFRACTION / Resolution: 3.41 Å

PDB-8k6i:
LnaB-Actin-PRUb ternary complex
Method: X-RAY DIFFRACTION / Resolution: 3.19 Å

PDB-8k6r:
LnaB-Actin-PRUb ternary complex in the presence of AMPPNP
Method: X-RAY DIFFRACTION / Resolution: 2.76 Å

PDB-8k6v:
LnaB-Actin-PRUb ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-AR6:
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL

ChemComp-PO4:
PHOSPHATE ION

ChemComp-HOH:
WATER

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

Source
  • legionella (bacteria)
  • homo sapiens (human)
  • oryctolagus cuniculus (rabbit)
KeywordsTOXIN / AMPylation / Legionella effector

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