Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Capturing structural intermediates in an animal-like cryptochrome photoreceptor by time-resolved crystallography.
Journal, issue, pages	Sci Adv, Vol. 11, Page eadu7247-eadu7247, Year 2025
Publish date	Apr 11, 2024 (structure data deposition date)
Authors	Maestre-Reyna, M. / Hosokawa, Y. / Wang, P.H. / Saft, M. / Caramello, N. / Engilberge, S. / Franz-Badur, S. / Gusti Ngurah Putu, E.P. / Nakamura, M. / Wu, W.J. ...Maestre-Reyna, M. / Hosokawa, Y. / Wang, P.H. / Saft, M. / Caramello, N. / Engilberge, S. / Franz-Badur, S. / Gusti Ngurah Putu, E.P. / Nakamura, M. / Wu, W.J. / Wu, H.Y. / Lee, C.C. / Huang, W.C. / Huang, K.F. / Chang, Y.K. / Yang, C.H. / Fong, M.I. / Lin, W.T. / Yang, K.C. / Ban, Y. / Imura, T. / Kazuoka, A. / Tanida, E. / Owada, S. / Joti, Y. / Tanaka, R. / Tanaka, T. / Kang, J. / Luo, F. / Tono, K. / Kiontke, S. / Korf, L. / Umena, Y. / Tosha, T. / Bessho, Y. / Nango, E. / Iwata, S. / Royant, A. / Tsai, M.D. / Yamamoto, J. / Essen, L.O.
External links	Sci Adv / PubMed:40378212
Methods	X-ray diffraction
Resolution	1.64 - 2.2 Å
Structure data	PDB-8z1j: SFX structure of dark adapted CraCRY Method: X-RAY DIFFRACTION / Resolution: 1.64 Å PDB-8z24: SFX structure of CraCRY 10 ns after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.95 Å PDB-8z26: SFX structure of CraCRY 30 ns after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z2d: SFX structure of CraCRY 100 ns after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z3d: SFX structure of CraCRY 1 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z3g: SFX structure of CraCRY 3 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.95 Å PDB-8z3l: SFX structure of CraCRY 10 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z3x: SFX structure of CraCRY 30 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.95 Å PDB-8z41: SFX structure of CraCRY 100 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.95 Å PDB-8z44: SFX structure of CraCRY 300 ns after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z45: SFX structure of CraCRY 300 us after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z4k: SFX structure of CraCRY 1 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z4m: SFX structure of CraCRY 7 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-8z4p: SFX structure of CraCRY 33 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2.05 Å PDB-8z4u: SFX structure of CraCRY 66 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z6i: SFX structure of CraCRY 100 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-8z6j: SFX structure of CraCRY 133 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-8z6k: SFX structure of CraCRY 166 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2.2 Å PDB-8z8f: SFX structure of CraCRY 200 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2.15 Å PDB-8z8k: SFX structure of CraCRY 233 ms after photoexcitation of the oxidized protein Method: X-RAY DIFFRACTION / Resolution: 2.2 Å PDB-8za8: SFX structure of CraCRY in the fully reduced state Method: X-RAY DIFFRACTION / Resolution: 2.1 Å PDB-8zlr: SFX structure of CraCRY in the semiquinone state Method: X-RAY DIFFRACTION / Resolution: 2.15 Å
Chemicals	ChemComp-FAD: FLAVIN-ADENINE DINUCLEOTIDE / FADYM ChemComp-CL: Unknown entry ChemComp-HOH: WATER ChemComp-FDA*: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Source	chlamydomonas reinhardtii cc3269 (plant) chlamydomonas reinhardtii (plant)
Keywords	FLAVOPROTEIN / photoreceptor / time-resolved crystallography / resting state / 10 ns time-point / 30 ns time-point / 100 ns time-point / 1 us time-point / 3 us time-point / 10 us time-point / 30 us time-point / 100 us time-point / 300 ns time-point / 300 us time-point / 1 ms time-point / 7 ms time-point / 33 ms time-point / 66 ms time-point / 100 ms time-point / 133 ms time-point / 166 ms time-point / 200 ms time-point / 233 ms time-point / fully reduced state / semiquinone state