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Structure paper

TitleStructural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Journal, issue, pagesActa Crystallogr. ,Sect. F, Vol. 81, Page 53-61, Year 2025
Publish dateDec 5, 2024 (structure data deposition date)
AuthorsClark, N.D. / Li, C. / Malkowski, M.G.
External linksActa Crystallogr. ,Sect. F / PubMed:39846228
MethodsX-ray diffraction
Resolution1.63 - 2.02 Å
Structure data

PDB-9mdk:
Crystal Structure of E64-inhibited C0362 (TDE_0362 [TDE0362] resi 205-647)
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

PDB-9mdm:
Crystal Structure of C412S Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-9mdo:
Crystal Structure of Y559A Prosegment Binding Loop Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Method: X-RAY DIFFRACTION / Resolution: 2.02 Å

Chemicals

ChemComp-E64:
N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

Source
  • treponema denticola (bacteria)
KeywordsHYDROLASE / Inhibitor complex / Papain-superfamily cysteine protease; virulence factor; TDE_0362; alpha/beta hydrolase / Papain-superfamily cysteine protease / virulence factor / TDE_0362 / alpha/beta hydrolase

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