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TitleMechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.
Journal, issue, pagesNat Commun, Vol. 15, Page 10906-10906, Year 2024
Publish dateDec 13, 2023 (structure data deposition date)
AuthorsPerez-Cruz, C. / Moraleda-Montoya, A. / Liebana, R. / Terrones, O. / Arrizabalaga, U. / Garcia-Alija, M. / Lorizate, M. / Martinez Gascuena, A. / Garcia-Alvarez, I. / Nieto-Garai, J.A. ...Perez-Cruz, C. / Moraleda-Montoya, A. / Liebana, R. / Terrones, O. / Arrizabalaga, U. / Garcia-Alija, M. / Lorizate, M. / Martinez Gascuena, A. / Garcia-Alvarez, I. / Nieto-Garai, J.A. / Olazar-Intxausti, J. / Rodriguez-Colinas, B. / Mann, E. / Chiara, J.L. / Contreras, F.X. / Guerin, M.E. / Trastoy, B. / Alonso-Saez, L.
External linksNat Commun / PubMed:39738071
MethodsX-ray diffraction
Resolution1.404 - 2.5 Å
Structure data

PDB-8rg3:
Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 1 21 1
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-8rg4:
Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 21 21 21
Method: X-RAY DIFFRACTION / Resolution: 1.404 Å

PDB-8rg5:
Crystal structure of PbFucA from Planctomycetes bacterium K23_9 in P 4 21 2
Method: X-RAY DIFFRACTION / Resolution: 2.18 Å

PDB-9f9v:
Crystal structure of 892_05174 from Planctomycetota strain 892
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-MPO:
3[N-MORPHOLINO]PROPANE SULFONIC ACID / pH buffer*YM

ChemComp-SO4:
SULFATE ION

ChemComp-CA:
Unknown entry

Source
  • planctomycetes bacterium k23_9 (bacteria)
  • rhodopirellula (bacteria)
KeywordsHYDROLASE / Fucoidan / endo-fucoidanase / endo-fuconase / GH168 / glycosyl hydrolase / endofucoidanase / endofuconase / endo-fucanase

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