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TitleSignatureFinder enables sequence mining to identify cobalamin-dependent photoreceptor proteins.
Journal, issue, pagesFebs J., Vol. 292, Page 635-652, Year 2025
Publish dateMay 9, 2023 (structure data deposition date)
AuthorsYu, Y. / Jeffreys, L.N. / Poddar, H. / Hill, A. / Johannissen, L. / Dai, F. / Sakuma, M. / Leys, D. / Heyes, D.J. / Zhang, S. / Scrutton, N.S.
External linksFebs J. / PubMed:39718193
MethodsX-ray diffraction
Resolution2.3 Å
Structure data

PDB-8jbs:
B12-binding domain from Chloracidobacterium thermophilum MerR family protein, dark state
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-8jbt:
B12-binding domain from Chloracidobacterium thermophilum MerR family protein, anaerobic light state
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

Chemicals

ChemComp-B12:
COBALAMIN

ChemComp-5AD:
5'-DEOXYADENOSINE

ChemComp-HOH:
WATER

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-P6G:
HEXAETHYLENE GLYCOL / precipitant*YM

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-GOL:
GLYCEROL

Source
  • chloracidobacterium thermophilum (bacteria)
KeywordsTRANSCRIPTION / B12-dependent transcription regulators from the MerR superfamily

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