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TitleImmunization of cows with HIV envelope trimers generates broadly neutralizing antibodies to the V2-apex from the ultralong CDRH3 repertoire.
Journal, issue, pagesPLoS Pathog, Vol. 20, Issue 9, Page e1012042, Year 2024
Publish dateSep 9, 2024
AuthorsPilar X Altman / Gabriel Ozorowski / Robyn L Stanfield / Jeremy Haakenson / Michael Appel / Mara Parren / Wen-Hsin Lee / Huldah Sang / Jordan Woehl / Karen Saye-Francisco / Leigh M Sewall / Collin Joyce / Ge Song / Katelyn Porter / Elise Landais / Raiees Andrabi / Ian A Wilson / Andrew B Ward / Waithaka Mwangi / Vaughn V Smider / Dennis R Burton / Devin Sok /
PubMed AbstractThe generation of broadly neutralizing antibodies (bnAbs) to conserved epitopes on HIV Envelope (Env) is one of the cornerstones of HIV vaccine research. The animal models commonly used for HIV do ...The generation of broadly neutralizing antibodies (bnAbs) to conserved epitopes on HIV Envelope (Env) is one of the cornerstones of HIV vaccine research. The animal models commonly used for HIV do not reliably produce a potent broadly neutralizing serum antibody response, with the exception of cows. Cows have previously produced a CD4 binding site response by homologous prime and boosting with a native-like Env trimer. In small animal models, other engineered immunogens were shown to focus antibody responses to the bnAb V2-apex region of Env. Here, we immunized two groups of cows (n = 4) with two regimens of V2-apex focusing Env immunogens to investigate whether antibody responses could be generated to the V2-apex on Env. Group 1 was immunized with chimpanzee simian immunodeficiency virus (SIV)-Env trimer that shares its V2-apex with HIV, followed by immunization with C108, a V2-apex focusing immunogen, and finally boosted with a cross-clade native-like trimer cocktail. Group 2 was immunized with HIV C108 Env trimer followed by the same HIV trimer cocktail as Group 1. Longitudinal serum analysis showed that one cow in each group developed serum neutralizing antibody responses to the V2-apex. Eight and 11 bnAbs were isolated from Group 1 and Group 2 cows, respectively, and showed moderate breadth and potency. Potent and broad responses in this study developed much later than previous cow immunizations that elicited CD4bs bnAbs responses and required several different immunogens. All isolated bnAbs were derived from the ultralong CDRH3 repertoire. The finding that cow antibodies can target more than one broadly neutralizing epitope on the HIV surface reveals the generality of elongated structures for the recognition of highly glycosylated proteins. The exclusive isolation of ultralong CDRH3 bnAbs, despite only comprising a small percent of the cow repertoire, suggests these antibodies outcompete the long and short CDRH3 antibodies during the bnAb response.
External linksPLoS Pathog / PubMed:39250525 / PubMed Central
MethodsEM (single particle) / X-ray diffraction
Resolution1.83 - 3.3 Å
Structure data

EMDB-41498, PDB-8tq1:
HIV-1 BG505 Env SOSIP in complex with bovine Fab Bess4 and non-human primate Fab RM20A3
Method: EM (single particle) / Resolution: 3.3 Å

PDB-8vbj:
Structure of bovine anti-HIV Fab ElsE2
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-8vbk:
Structure of bovine anti-HIV Fab ElsE5
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-8vbl:
Structure of bovine anti-HIV Fab ElsE6
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-8vbm:
Structure of bovine anti-HIV Fab ElsE7
Method: X-RAY DIFFRACTION / Resolution: 2.54 Å

PDB-8vbn:
Structure of bovine anti-HIV Fab ElsE8
Method: X-RAY DIFFRACTION / Resolution: 1.83 Å

PDB-8vbo:
Structure of bovine anti-HIV Fab ElsE9
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-8vbp:
Structure of bovine anti-HIV Fab Bess4
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-8vbq:
Structure of bovine anti-HIV Fab Bess7
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-8vbr:
Structure of bovine anti-HIV Fab ElsE11
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-K:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

Source
  • human immunodeficiency virus 1
  • macaca mulatta (Rhesus monkey)
  • bos taurus (cattle)
KeywordsVIRAL PROTEIN/Immune System / SOSIP / apex / broadly neutralizing antibody / Env / HIV-1 / VIRAL PROTEIN / VIRAL PROTEIN-Immune System complex / IMMUNE SYSTEM / antibody / Fab fragment / bovine

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