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Structure paper

TitleStructural basis for promiscuity in ligand recognition by yjdF riboswitch.
Journal, issue, pagesCell Discov, Vol. 10, Page 37-37, Year 2024
Publish dateOct 10, 2023 (structure data deposition date)
AuthorsKrochmal, D. / Roman, C. / Lewicka, A. / Shao, Y. / Piccirilli, J.A.
External linksCell Discov / PubMed:38565535
MethodsX-ray diffraction
Resolution2.77 - 3.05 Å
Structure data

PDB-8uiw:
yjdF riboswitch from R. gauvreauii in complex with chelerythrine bound to Fab BL3-6 S97N
Method: X-RAY DIFFRACTION / Resolution: 2.77 Å

PDB-8uta:
yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N
Method: X-RAY DIFFRACTION / Resolution: 3.05 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CTI:
1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium / inhibitor, alkaloid*YM

ChemComp-OS:
OSMIUM ION

ChemComp-K:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-PRL:
PROFLAVIN

Source
  • mus musculus (house mouse)
  • ruminococcus gauvreauii (bacteria)
KeywordsRNA / riboswitch / azaaromatic / translation / antibody

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