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Structure paper

TitleBoGH13A Sus from Bacteroides ovatus represents a novel alpha-amylase used for Bacteroides starch breakdown in the human gut.
Journal, issue, pagesCell. Mol. Life Sci., Vol. 80, Page 232-232, Year 2023
Publish dateJun 23, 2022 (structure data deposition date)
AuthorsBrown, H.A. / DeVeaux, A.L. / Juliano, B.R. / Photenhauer, A.L. / Boulinguiez, M. / Bornschein, R.E. / Wawrzak, Z. / Ruotolo, B.T. / Terrapon, N. / Koropatkin, N.M.
External linksCell. Mol. Life Sci. / PubMed:37500984
MethodsX-ray diffraction
Resolution1.89 - 2.09 Å
Structure data

PDB-8dge:
BoGH13ASus from Bacteroides ovatus
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-8dl1:
BoGH13ASus-E523Q from Bacteroides ovatus bound to maltoheptaose
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

PDB-8dl2:
BoGH13ASus from Bacteroides ovatus bound to acarbose
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-MN:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-IMD:
IMIDAZOLE

ChemComp-HOH:
WATER

ChemComp-ACT:
ACETATE ION

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-GLC:
alpha-D-glucopyranose

ChemComp-GOL:
GLYCEROL

Source
  • bacteroides ovatus atcc 8483 (bacteria)
KeywordsHYDROLASE / alpha-amylase / starch / GH13 / glycoside hydrolase

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