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TitleAmbient temperature structure of phosphoketolase from Bifidobacterium longum determined by serial femtosecond X-ray crystallography.
Journal, issue, pagesActa Crystallogr D Struct Biol, Vol. 79, Page 290-303, Year 2023
Publish dateJun 1, 2020 (structure data deposition date)
AuthorsNakata, K. / Kashiwagi, T. / Kunishima, N. / Naitow, H. / Matsuura, Y. / Miyano, H. / Mizukoshi, T. / Tono, K. / Yabashi, M. / Nango, E. / Iwata, S.
External linksActa Crystallogr D Struct Biol / PubMed:36974963
MethodsX-ray diffraction
Resolution2.5 Å
Structure data

PDB-7c8h:
Ambient temperature structure of Bifidobacterium longum phosphoketolase with thiamine diphosphate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-7c8i:
Ambient temperature structure of Bifidobacgterium longum phosphoketolase with thiamine diphosphate and phosphoenol pyuruvate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

Chemicals

ChemComp-TPP:
THIAMINE DIPHOSPHATE

ChemComp-CA:
Unknown entry

ChemComp-LMR:
(2S)-2-hydroxybutanedioic acid

ChemComp-MLA:
MALONIC ACID

ChemComp-SIN:
SUCCINIC ACID

ChemComp-HOH:
WATER

ChemComp-PEP:
PHOSPHOENOLPYRUVATE

Source
  • bifidobacterium longum (bacteria)
KeywordsLYASE / XFEL-SFX / ambient temperature / aldehyde-lyase activity / carbohydrate metabolic process / thiamine-diphosphate (ThDpp) / phosphoenol pyuruvate (PEP)

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