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TitleEnzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Journal, issue, pagesFebs J., Year 2022
Publish dateAug 14, 2014 (structure data deposition date)
AuthorsHaataja, T. / Gado, J.E. / Nutt, A. / Anderson, N.T. / Nilsson, M. / Momeni, M.H. / Isaksson, R. / Valjamae, P. / Johansson, G. / Payne, C.M. / Stahlberg, J.
External linksFebs J. / PubMed:35997626
MethodsX-ray diffraction
Resolution1.09 - 1.7 Å
Structure data

PDB-4uwt:
Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-4v0z:
o-nitrophenyl Cellobioside as an Active Site Probe for Family 7 Cellobiohydrolases
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-7nyt:
Trichoderma reesei Cel7A E212Q mutant in complex with lactose.
Method: X-RAY DIFFRACTION / Resolution: 1.09 Å

PDB-7oc8:
Trichoderma reesei Cel7A E212Q mutant in complex with pNPL
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CO:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-NPO:
P-NITROPHENOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

ChemComp-OPO:
O-NITROPHENOL

ChemComp-BGC:
beta-D-glucopyranose

ChemComp-GAL:
beta-D-galactopyranose

Source
  • trichoderma reesei qm9414 (fungus)
  • hypocrea jecorina (fungus)
KeywordsHYDROLASE / GLYCOSIDE HYDROLASE / CELLULASE / ENZYME KINETICS / NON-PRODUCTIVE BINDING / GLYCOSIDASE / GLYCOPROTEIN / PYRROLIDONE CARBOXYLIC ACID / POLYSACCHARIDE DEGRADATION / CELLULOSE DEGRADATION / CARBOHYDRATE METABOLISM / HYPOCREA JECORINA

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